PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG022516t2
Common NameTCM_022516
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 435aa    MW: 49096.3 Da    PI: 8.751
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG022516t2genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1217e-0783140158
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                       eke +r rr   NRe+Ar   +R++a +e+L+ kv+ L+ eN+ Lk   e   ke+++
  Thecc1EG022516t2  83 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 140
                       799******************************************9544444455555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-480138No hitNo description
SMARTSM003381.3E-683147IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.71485148IPR004827Basic-leucine zipper domain
CDDcd147026.07E-1388138No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MLTNKESDWQ MIRERQILYS IMGMPEKDVW EDRQHDQMTG NDVLIKSVKA EQNAESVKSS  60
PTCATKYMSG GGGRSRQNLT EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL  120
TRENENLKRA KELALKEYKS QESTNKHLKA QMVKAIKAEE GEAPRELKLA HQISGPSRNY  180
PFYFYNQHPF PPFCWPSIVQ SSNPVQTQCE HQNAIVVSSS ISAPTNGRLD SSHDQENPIN  240
VNGPKTPLYV VPYPWFFSLP DHGNELHLRP CCGPKNNKDE TSANNRFSAG CSLKSVVHEE  300
KYNFSLPTEV EKEAYGSIEA SSNNQNCTSV RLPSDGSVQC IRYQIKEEVI LPTPLCSAGP  360
TFVVEQENTP DVNTEAARVR ACHFVGALPE ENQESTNYTT KKVLDAAAAA EARKRRKELT  420
KLKNLHGRQC RTHR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1412417RKRRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007027677.10.0Basic-leucine zipper transcription factor family protein, putative isoform 2
TrEMBLA0A061F1210.0A0A061F121_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 2
STRINGPOPTR_0006s11550.11e-110(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.17e-57bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]